STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_003991Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
BN1708_017798
RIBORED_LARGE domain-containing protein.
  
 0.999
BN1708_001448
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.999
BN1708_001455
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.999
BN1708_016960
RIBORED_LARGE domain-containing protein.
  
 0.999
BN1708_015257
Nucleoside diphosphate kinase.
    
 0.932
BN1708_006941
Thioredoxin domain-containing protein.
   
 
 0.919
BN1708_012672
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 
 0.905
BN1708_003747
Thymidylate_kin domain-containing protein.
   
 
 0.905
BN1708_017611
Nucleoside diphosphate kinase.
    
 0.901
BN1708_004484
Nudix hydrolase domain-containing protein; Belongs to the GDA1/CD39 NTPase family.
    
  0.895
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.