STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_000609rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (379 aa)    
Predicted Functional Partners:
BN1708_010821
Uncharacterized protein.
   
 
 0.995
BN1708_017907
Uncharacterized protein.
   
 
 0.995
BN1708_013647
S4 RNA-binding domain-containing protein.
   
 
 0.995
BN1708_013667
Uncharacterized protein.
   
   0.994
BN1708_001882
WD_REPEATS_REGION domain-containing protein.
   
   0.993
BN1708_015096
Sas10 domain-containing protein.
   
   0.993
BN1708_017449
Uncharacterized protein.
   
 
 0.991
BN1708_005472
Uncharacterized protein.
   
   0.991
BN1708_013774
Bms1-type G domain-containing protein.
   
 
 0.990
BN1708_018269
DUF663 domain-containing protein.
   
 
 0.990
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.