STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_004491Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
BN1708_019603
Uncharacterized protein.
 
     0.939
BN1708_018610
RimK domain-containing protein.
 
     0.924
BN1708_009802
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
     
 0.877
BN1708_007649
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
     
 0.877
BN1708_010691
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.862
BN1708_016152
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.862
BN1708_020531
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.862
BN1708_015786
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.708
BN1708_020760
Uncharacterized protein.
    
 0.598
BN1708_010690
Uncharacterized protein.
    
 0.598
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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