STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_0152665_nucleotid_C domain-containing protein; Belongs to the 5'-nucleotidase family. (578 aa)    
Predicted Functional Partners:
BN1708_019653
Thymidylat_synt domain-containing protein.
    
  0.866
BN1708_009432
Uncharacterized protein.
    
 0.771
BN1708_009809
AB hydrolase-1 domain-containing protein.
  
 
 0.771
BN1708_011923
AB hydrolase-1 domain-containing protein.
  
 
 0.771
BN1708_011928
AB hydrolase-1 domain-containing protein.
  
 
 0.771
BN1708_004457
AB hydrolase-1 domain-containing protein.
  
 
 0.771
BN1708_008880
A_deaminase domain-containing protein.
    
 0.771
BN1708_010281
Uncharacterized protein.
    
 0.760
BN1708_007521
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.760
BN1708_007575
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation; Belongs to the HAM1 NTPase family.
  
 
  0.741
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.