STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_004816Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
BN1708_000943
Uncharacterized protein.
    
 0.932
BN1708_000942
Phosphodiesterase.
    
 0.932
BN1708_011234
Uncharacterized protein.
    
 0.795
BN1708_012728
Uncharacterized protein.
    
 0.795
BN1708_018172
Uncharacterized protein.
    
 0.795
BN1708_007003
Uncharacterized protein.
    
 0.795
BN1708_016934
Guanylate cyclase domain-containing protein.
    
 0.795
BN1708_007575
Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation; Belongs to the HAM1 NTPase family.
   
 
  0.750
BN1708_002116
Uncharacterized protein.
    
  0.749
BN1708_015135
Uncharacterized protein.
    
  0.749
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.