STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_018627Uncharacterized protein. (123 aa)    
Predicted Functional Partners:
BN1708_016442
Uncharacterized protein.
  
 
 0.988
BN1708_002321
Aamy domain-containing protein.
  
 0.984
BN1708_017676
Uncharacterized protein.
  
 0.984
BN1708_006708
Uncharacterized protein.
  
 
 0.970
BN1708_016103
Uncharacterized protein.
  
 0.957
BN1708_016979
hDGE_amylase domain-containing protein.
  
 0.953
BN1708_017354
Uncharacterized protein.
  
 0.953
BN1708_013912
Uncharacterized protein.
  
 0.953
BN1708_005395
Uncharacterized protein.
  
 0.953
BN1708_019596
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
     0.947
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.