STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_016193SH3 domain-containing protein. (679 aa)    
Predicted Functional Partners:
BN1708_014459
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.949
BN1708_019915
Uncharacterized protein.
 
     0.913
BN1708_003996
Uncharacterized protein.
 
      0.900
BN1708_013343
DUF2183 domain-containing protein.
    
 
 0.865
BN1708_018062
Uncharacterized protein.
    
 
 0.865
BN1708_006832
DUF2183 domain-containing protein.
    
 
 0.865
BN1708_017434
Protein kinase domain-containing protein.
    
 
 0.685
BN1708_003969
Protein kinase domain-containing protein.
    
 
 0.685
BN1708_012105
Uncharacterized protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.615
BN1708_016455
Uncharacterized protein.
   
 0.615
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.