STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_006154Zn(2)-C6 fungal-type domain-containing protein. (548 aa)    
Predicted Functional Partners:
GET3
ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]
    
 0.933
BN1708_000633
Arsenical pump-driving ATPase; Belongs to the arsA ATPase family.
    
 0.933
BN1708_016816
ArsA_ATPase domain-containing protein.
    
 0.933
BN1708_014146
UDG domain-containing protein.
   
 0.640
BN1708_020511
Uncharacterized protein.
   
 0.640
BN1708_003541
WD_REPEATS_REGION domain-containing protein; Belongs to the complex I LYR family.
   
 0.617
BN1708_018362
Uncharacterized protein.
   
 0.617
BN1708_010044
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
  0.540
BN1708_003893
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
    
  0.540
BN1708_001204
Uncharacterized protein.
    
 
 0.537
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.