STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_008053Uncharacterized protein. (85 aa)    
Predicted Functional Partners:
BN1708_000132
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.999
BN1708_008903
Uncharacterized protein.
   
 0.999
BN1708_011386
Uncharacterized protein.
   
 0.999
BN1708_003477
Uncharacterized protein.
   
 0.999
BN1708_014767
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.999
BN1708_014800
Uncharacterized protein.
   
 0.999
BN1708_016283
zf-CHCC domain-containing protein.
   
 0.999
BN1708_016789
Uncharacterized protein.
   
 0.999
BN1708_009445
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.998
BN1708_008346
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.998
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.