STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_008765Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family. (360 aa)    
Predicted Functional Partners:
BN1708_007120
Uncharacterized protein.
    
 
 0.721
BN1708_014453
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 
 0.574
BN1708_001131
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 
 0.574
BN1708_012762
Uncharacterized protein.
    
 
 0.569
BN1708_013189
Uncharacterized protein.
    
 
 0.569
BN1708_018305
Uncharacterized protein.
    
 
 0.569
BN1708_017059
Uncharacterized protein.
    
 
 0.556
BN1708_004085
Uncharacterized protein.
    
 
 0.556
BN1708_014545
Uncharacterized protein.
    
 
 0.556
BN1708_003426
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
   
 
 0.530
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
Server load: low (28%) [HD]