STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200051Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
MMYC01_210278
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.943
MMYC01_205367
Large subunit GTPase 1.
   
 
 0.915
MMYC01_202452
Curved DNA-binding protein.
   
 
 0.895
MMYC01_203112
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
 
 0.835
MMYC01_203963
Uncharacterized protein.
    
 
 0.832
MMYC01_208150
Uncharacterized protein.
   
 
 0.819
MMYC01_200726
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.807
MMYC01_203711
Ribosomal_L23eN domain-containing protein.
   
 
 0.798
MMYC01_206214
Uncharacterized protein.
    
   0.797
MMYC01_204775
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.797
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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