STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200148GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (347 aa)    
Predicted Functional Partners:
MMYC01_204383
Rho-type GTPase-activating protein 1.
    
 0.974
MMYC01_204904
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
    
 
0.955
MMYC01_203892
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.860
MMYC01_202369
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.842
MMYC01_204216
DNA-directed RNA polymerase II subunit RPB11.
    
 
 0.829
MMYC01_200518
Rho-type GTPase-activating protein 1.
    
 0.801
MMYC01_202902
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 
 0.740
MMYC01_201583
Rho GDP-dissociation inhibitor.
   
 0.682
MMYC01_203944
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 0.678
MMYC01_202591
Phosphatidylinositol 4-kinase PIK1a; Belongs to the PI3/PI4-kinase family.
    
 0.676
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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