STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200141GATA factor SREP. (358 aa)    
Predicted Functional Partners:
MMYC01_210062
Transcription factor of morphogenesis MCM1.
    
 0.836
MMYC01_206886
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.759
MMYC01_201239
Uncharacterized protein.
    
 0.751
MMYC01_204383
Rho-type GTPase-activating protein 1.
    
 0.715
MMYC01_208427
Histone H2A; Belongs to the histone H2A family.
    
 0.674
MMYC01_209513
Ribosomal protein arginine N-methyltransferase rmt3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.654
MMYC01_202342
Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.654
MMYC01_208384
Cross-pathway control protein 1.
    
 0.652
MMYC01_210196
Histone acetyltransferase GCN5.
    
  0.648
MMYC01_202985
Histone acetyltransferase GCN5.
    
  0.648
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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