STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200032Vigilin 1. (1287 aa)    
Predicted Functional Partners:
MMYC01_202663
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.804
MMYC01_206854
Zuotin.
   
   0.728
MMYC01_202787
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
   
 
 0.642
MMYC01_207525
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.635
MMYC01_204965
DNA damage tolerance protein RHC31.
    
 
 0.535
MMYC01_204766
Elongation factor 1-gamma 1.
   
   0.515
MMYC01_201312
[NU+] prion formation protein 1.
   
   0.511
MMYC01_210613
Elongation factor 1-gamma; Belongs to the GST superfamily.
   
   0.510
MMYC01_210205
Elongation factor 1-gamma; Belongs to the GST superfamily.
   
   0.510
MMYC01_209947
Elongation factor 3.
   
   0.469
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.