STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_210295H/ACA ribonucleoprotein complex subunit 3. (60 aa)    
Predicted Functional Partners:
MMYC01_201131
H/ACA ribonucleoprotein complex subunit 2.
   
 0.995
MMYC01_200380
Centromere/microtubule-binding protein cbf5.
   
 0.988
MMYC01_200362
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.966
MMYC01_207165
H/ACA ribonucleoprotein complex non-core subunit NAF1.
   
 
 0.887
MMYC01_210555
Uncharacterized protein.
   
 0.874
MMYC01_208485
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.874
MMYC01_206760
Ribosomal_L7Ae domain-containing protein.
   
 0.874
MMYC01_210317
Uncharacterized protein.
   
 0.869
MMYC01_207787
Uncharacterized protein.
   
 0.869
MMYC01_206847
Uncharacterized protein.
   
 0.869
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.