STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_210554Nitrogen assimilation transcription factor nit-4. (840 aa)    
Predicted Functional Partners:
MMYC01_208538
Ankyrin repeat, PH and SEC7 domain containing protein secG.
   
 0.960
MMYC01_207313
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
   
 0.954
MMYC01_204307
Serine/threonine-protein kinase ATG1.
   
 0.942
MMYC01_200834
Autophagy-related protein 3.
   
 0.940
MMYC01_203248
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 0.938
MMYC01_202256
Next to BRCA1 gene 1 protein.
   
 0.853
MMYC01_204107
Putative lipase atg15.
   
 
 0.849
MMYC01_207662
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.837
MMYC01_204584
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.760
MMYC01_206320
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.754
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.