STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_210506DNA damage-binding protein 1. (1156 aa)    
Predicted Functional Partners:
MMYC01_209195
DNA excision repair protein ckn1.
    
 0.999
MMYC01_206682
Cullin-4B; Belongs to the cullin family.
  
 0.999
MMYC01_204457
Cell division cycle protein cdt2.
    
 0.999
MMYC01_203707
E3 ubiquitin-protein ligase RBX1.
    
 0.999
MMYC01_204630
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.994
MMYC01_206916
WD repeat-containing protein 21.
    
 0.960
MMYC01_202070
LEC14B protein.
    
 0.958
MMYC01_205268
COP9 signalosome complex subunit 1.
    
 0.946
MMYC01_201890
Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family.
    
 
 0.924
MMYC01_208096
Switch 2.
    
 0.923
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.