STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209583CTD kinase subunit beta; Belongs to the cyclin family. (443 aa)    
Predicted Functional Partners:
MMYC01_201457
CTD kinase subunit alpha.
    
 0.966
MMYC01_201176
CTD kinase subunit gamma.
   
 
 0.914
MMYC01_200723
Serine/threonine-protein kinase bur1.
    
 0.902
MMYC01_202567
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.796
MMYC01_204269
Transcription elongation factor S-II.
    
 0.744
MMYC01_204759
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.740
MMYC01_205812
Cyclin pch1; Belongs to the cyclin family.
    
0.738
MMYC01_202145
RNA polymerase II holoenzyme cyclin-like subunit; Belongs to the cyclin family.
     
 0.701
MMYC01_207268
Cyclin CCL1; Belongs to the cyclin family.
     
 0.696
MMYC01_208994
Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily.
     
 0.695
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.