STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209588Uncharacterized protein. (511 aa)    
Predicted Functional Partners:
MMYC01_203233
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.820
MMYC01_201247
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.783
MMYC01_210450
Uncharacterized protein.
   
   0.776
MMYC01_202920
Uncharacterized protein.
   
 
 0.773
MMYC01_209589
Uncharacterized protein.
 
      0.767
MMYC01_200967
Sulfurtransferase.
   
 
 0.766
MMYC01_203317
Uncharacterized protein.
  
 
 0.763
MMYC01_200263
Uncharacterized protein.
   
 
 0.763
MMYC01_204566
Uncharacterized protein.
   
   0.746
MMYC01_206674
L51_S25_CI-B8 domain-containing protein.
   
   0.737
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.