STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209383MMS19 nucleotide excision repair protein. (1190 aa)    
Predicted Functional Partners:
MMYC01_206669
Protein AE7.
    
 0.983
MMYC01_209847
DNA repair helicase rad15.
    
 0.968
MMYC01_205306
ATP-dependent RNA helicase chl1.
    
 0.842
MMYC01_204476
ATP-dependent RNA helicase chl1.
    
 0.842
MMYC01_201187
Putative DNA repair helicase ercc3.
   
 
 0.811
MMYC01_202626
Cytosolic Fe-S cluster assembly factor NAR1; Belongs to the NARF family.
    
 0.808
MMYC01_203656
DNA polymerase.
    
 0.785
MMYC01_207692
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.757
MMYC01_208392
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.737
MMYC01_205633
Nitrogen assimilation transcription factor nit-4.
  
   
 0.647
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.