STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207784Usp domain-containing protein. (520 aa)    
Predicted Functional Partners:
MMYC01_203821
Superkiller protein 3.
    
 0.750
MMYC01_205580
Antiviral helicase SKI2.
    
 0.734
MMYC01_208964
Cell division control protein 73.
    
 0.691
MMYC01_207269
Putative ubiquitin-conjugating enzyme protein 17.
    
  0.679
MMYC01_207524
Uncharacterized protein.
    
 0.677
MMYC01_210506
DNA damage-binding protein 1.
    
  0.641
MMYC01_206682
Cullin-4B; Belongs to the cullin family.
    
  0.622
MMYC01_206920
Survival motor neuron-like protein 1.
   
  0.612
MMYC01_208488
RNA polymerase II-associated protein 1.
    
 0.609
MMYC01_207687
Uncharacterized protein.
    
 0.609
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.