STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208988Fumarylacetoacetate hydrolase domain-containing protein 2. (277 aa)    
Predicted Functional Partners:
MMYC01_207209
Homogentisate 1,2-dioxygenase.
  
 
 0.629
MMYC01_206465
Homogentisate 1,2-dioxygenase.
  
 
 0.629
MMYC01_204862
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
  0.595
MMYC01_204795
Fumarylacetoacetase.
     
 0.557
MMYC01_205419
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
 
      0.550
MMYC01_201507
Tryptophan synthase.
     
 0.525
MMYC01_210580
Succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family.
   
 0.500
MMYC01_210280
Putative betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.500
MMYC01_206867
Putative serine-O-acetyltransferase cys2.
   
 0.500
MMYC01_209519
Aldehyde dehydrogenase.
   
 0.500
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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