STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207949Terpene cyclase. (396 aa)    
Predicted Functional Partners:
MMYC01_208090
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.574
MMYC01_206168
Putative hexaprenyl pyrophosphate synthase, mitochondrial; Belongs to the FPP/GGPP synthase family.
     
 0.566
MMYC01_202557
Putative squalene synthase.
     
 0.566
MMYC01_203639
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.557
MMYC01_209134
Fusicoccadiene synthase.
     
 0.430
MMYC01_210545
Uncharacterized protein.
     
 0.416
MMYC01_201058
NADH dehydrogenase (Ubiquinone) complex I, assembly factor 6.
     
 0.410
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.