STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209513Ribosomal protein arginine N-methyltransferase rmt3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (565 aa)    
Predicted Functional Partners:
MMYC01_200912
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.893
MMYC01_209512
Intracellular protein transport protein USO1.
 
      0.874
MMYC01_202858
Nuclear localization sequence-binding protein.
   
 
 0.843
MMYC01_204776
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.836
MMYC01_202192
ATP-dependent RNA helicase dbp-3; Belongs to the DEAD box helicase family.
   
  0.811
MMYC01_202753
Pre-mRNA-splicing factor srp2.
   
 
 0.801
MMYC01_203321
ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family.
   
  0.794
MMYC01_201409
Ribosomal RNA-processing protein 12.
   
   0.793
MMYC01_208526
Myosin-11.
   
  0.772
MMYC01_205755
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.765
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.