STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209417DNA cross-link repair protein pso2/snm1. (905 aa)    
Predicted Functional Partners:
MMYC01_201035
Zinc finger CCCH domain-containing protein 45.
    
 0.998
MMYC01_204142
Protein cft1.
   
 0.931
MMYC01_202273
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.922
MMYC01_205018
mRNA cleavage and polyadenylation specificity factor complex subunit pta1.
   
 0.921
MMYC01_209962
Benzoate 4-monooxygenase; Belongs to the cytochrome P450 family.
 
      0.894
MMYC01_205011
mRNA 3'-end-processing protein yth-1.
    
 0.864
MMYC01_202877
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.857
MMYC01_206924
Protein PCF11.
    
 0.852
MMYC01_202344
Crossover junction endonuclease MUS81.
   
 0.831
MMYC01_209930
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
 0.814
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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