Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MMYC01_201035 | MMYC01_202877 | A0A175WDE1 | A0A175W9D2 | Zinc finger CCCH domain-containing protein 45. | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | 0.984 |
MMYC01_201035 | MMYC01_204142 | A0A175WDE1 | A0A175W994 | Zinc finger CCCH domain-containing protein 45. | Protein cft1. | 0.998 |
MMYC01_201035 | MMYC01_205011 | A0A175WDE1 | A0A175W1C4 | Zinc finger CCCH domain-containing protein 45. | mRNA 3'-end-processing protein yth-1. | 0.527 |
MMYC01_201035 | MMYC01_205018 | A0A175WDE1 | A0A175W2G9 | Zinc finger CCCH domain-containing protein 45. | mRNA cleavage and polyadenylation specificity factor complex subunit pta1. | 0.975 |
MMYC01_201035 | MMYC01_206924 | A0A175WDE1 | A0A175VWT1 | Zinc finger CCCH domain-containing protein 45. | Protein PCF11. | 0.997 |
MMYC01_201035 | MMYC01_209417 | A0A175WDE1 | A0A175VTN1 | Zinc finger CCCH domain-containing protein 45. | DNA cross-link repair protein pso2/snm1. | 0.998 |
MMYC01_202273 | MMYC01_202344 | A0A175VRH7 | A0A175WDY5 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Crossover junction endonuclease MUS81. | 0.564 |
MMYC01_202273 | MMYC01_209417 | A0A175VRH7 | A0A175VTN1 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | DNA cross-link repair protein pso2/snm1. | 0.922 |
MMYC01_202273 | MMYC01_209930 | A0A175VRH7 | A0A175VPJ0 | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.981 |
MMYC01_202344 | MMYC01_202273 | A0A175WDY5 | A0A175VRH7 | Crossover junction endonuclease MUS81. | ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. | 0.564 |
MMYC01_202344 | MMYC01_209417 | A0A175WDY5 | A0A175VTN1 | Crossover junction endonuclease MUS81. | DNA cross-link repair protein pso2/snm1. | 0.831 |
MMYC01_202344 | MMYC01_209930 | A0A175WDY5 | A0A175VPJ0 | Crossover junction endonuclease MUS81. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.845 |
MMYC01_202877 | MMYC01_201035 | A0A175W9D2 | A0A175WDE1 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | Zinc finger CCCH domain-containing protein 45. | 0.984 |
MMYC01_202877 | MMYC01_204142 | A0A175W9D2 | A0A175W994 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | Protein cft1. | 0.991 |
MMYC01_202877 | MMYC01_205011 | A0A175W9D2 | A0A175W1C4 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | mRNA 3'-end-processing protein yth-1. | 0.994 |
MMYC01_202877 | MMYC01_205018 | A0A175W9D2 | A0A175W2G9 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | mRNA cleavage and polyadenylation specificity factor complex subunit pta1. | 0.987 |
MMYC01_202877 | MMYC01_206924 | A0A175W9D2 | A0A175VWT1 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | Protein PCF11. | 0.960 |
MMYC01_202877 | MMYC01_209417 | A0A175W9D2 | A0A175VTN1 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | DNA cross-link repair protein pso2/snm1. | 0.857 |
MMYC01_204142 | MMYC01_201035 | A0A175W994 | A0A175WDE1 | Protein cft1. | Zinc finger CCCH domain-containing protein 45. | 0.998 |
MMYC01_204142 | MMYC01_202877 | A0A175W994 | A0A175W9D2 | Protein cft1. | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | 0.991 |
page 1 of 3