STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208520L-rhamnonate dehydratase. (429 aa)    
Predicted Functional Partners:
MMYC01_202966
L-rhamnono-gamma-lactonase.
     
 0.893
MMYC01_205447
Putative 4-hydroxy-2-oxoglutarate aldolase, mitochondrial.
   
 
 0.884
MMYC01_204147
UDP-N-acetylglucosamine pyrophosphorylase.
 
 
    0.867
MMYC01_208522
L-rhamnose-1-dehydrogenase.
 
    
 0.809
MMYC01_206160
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.721
MMYC01_207876
Malonyl CoA-acyl carrier protein transacylase.
   
 0.711
MMYC01_210016
Nonribosomal peptide synthetase 14.
   
 0.629
MMYC01_208347
Putative 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; Belongs to the DapA family.
   
 
 0.599
MMYC01_208536
L-threo-3-deoxy-hexylosonate aldolase; Belongs to the DapA family.
   
 
 0.599
MMYC01_202716
Putative 4-hydroxy-2-oxoglutarate aldolase, mitochondrial.
   
 
 0.599
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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