STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208616DNA repair protein rhp54. (824 aa)    
Predicted Functional Partners:
MMYC01_203022
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.972
MMYC01_210606
DNA repair protein rhp55.
   
 
 0.926
MMYC01_208352
ATP-dependent DNA helicase srs2.
   
 
 0.923
MMYC01_204950
Protein VAC14.
 
  
   0.905
MMYC01_202344
Crossover junction endonuclease MUS81.
   
 0.853
MMYC01_202253
DNA repair and recombination protein rhm52.
    
 
 0.837
MMYC01_208224
Exodeoxyribonuclease 1.
   
 0.811
MMYC01_202965
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 0.767
MMYC01_204218
Werner syndrome ATP-dependent helicase.
   
 
 0.766
MMYC01_201057
DNA repair protein rad5.
  
0.741
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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