STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209174Putative glycine--tRNA ligase. (662 aa)    
Predicted Functional Partners:
MMYC01_202447
DNA polymerase gamma, mitochondrial.
   
 
 0.916
MMYC01_200713
Serine--tRNA ligase, cytoplasmic.
   
  
 0.863
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.838
MMYC01_207742
Tyrosine--tRNA ligase.
  
  
 0.819
MMYC01_207273
Putative glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.806
MMYC01_209009
Leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.763
MMYC01_202298
Leucine--tRNA ligase, cytoplasmic.
  
 
 0.763
MMYC01_203831
Asparagine--tRNA ligase, mitochondrial.
  
 
 0.762
MMYC01_207173
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.760
MMYC01_209949
Putative glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.759
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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