STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_209614Biotin--protein ligase. (688 aa)    
Predicted Functional Partners:
MMYC01_204157
Acetyl-CoA carboxylase.
  
 0.992
MMYC01_203881
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
    
 0.990
MMYC01_202089
Putative methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
 
 0.990
MMYC01_202948
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 
 0.990
MMYC01_208066
Pantothenate synthetase.
  
 
 0.909
MMYC01_204719
Biotin synthase.
  
 
 0.893
MMYC01_207157
Thymidylate synthase.
  
 
 0.854
MMYC01_204715
Uncharacterized protein.
  
 
 0.827
MMYC01_208377
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.772
MMYC01_202233
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.772
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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