STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208173D-lactate dehydrogenase [cytochrome] 1, mitochondrial. (608 aa)    
Predicted Functional Partners:
MMYC01_203612
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
 
 
 0.890
MMYC01_204450
Cytochrome b2, mitochondrial.
 
 
 0.872
MMYC01_208172
Clr5 domain-containing protein.
 
      0.862
MMYC01_209979
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.833
MMYC01_201184
D-lactate dehydrogenase [cytochrome] 2, mitochondrial.
  
  
 
0.833
MMYC01_201181
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.829
MMYC01_205453
Malic enzyme.
   
 
 0.812
MMYC01_205372
NADP-dependent malic enzyme.
   
 
 0.812
MMYC01_201669
D-lactate dehydrogenase [cytochrome], mitochondrial.
  
  
 
0.811
MMYC01_202948
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
  0.808
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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