STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208639Lovastatin diketide synthase LovF. (2371 aa)    
Predicted Functional Partners:
MMYC01_204604
Nonribosomal peptide synthetase 12.
  
 0.586
MMYC01_201895
4HBT domain-containing protein.
   
 0.573
MMYC01_210016
Nonribosomal peptide synthetase 14.
  
 
0.568
MMYC01_207006
Nonribosomal peptide synthetase 1.
  
  0.566
MMYC01_207876
Malonyl CoA-acyl carrier protein transacylase.
  
 0.540
MMYC01_209687
Linear gramicidin synthase subunit D.
   
 0.492
MMYC01_209074
Nonribosomal peptide synthetase 4.
   
 0.488
MMYC01_203913
Nonribosomal peptide synthetase 1.
   
 0.488
MMYC01_200280
Nonribosomal peptide synthetase 10.
   
 0.488
MMYC01_203516
L-aminoadipate-semialdehyde dehydrogenase large subunit.
 
 
 0.487
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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