STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207984RHOMBOID-like protein. (545 aa)    
Predicted Functional Partners:
MMYC01_205861
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
 
      0.877
MMYC01_202508
Stomatin-like protein 2, mitochondrial.
   
 0.700
MMYC01_201135
Prohibitin.
   
 0.700
MMYC01_201961
Stomatin-like protein 3.
   
 0.700
MMYC01_206248
Putative 5-formyltetrahydrofolate cyclo-ligase.
  
    0.529
MMYC01_202845
Rhomboid protein 1, mitochondrial.
      
 0.485
MMYC01_203656
DNA polymerase.
 
      0.471
MMYC01_204362
Nitrogen permease regulator 3.
      
 0.467
MMYC01_207187
Heterokaryon incompatibility protein 6, OR allele.
      
 0.448
MMYC01_203141
Mitochondrial import inner membrane translocase subunit tim23.
   
 
 0.438
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.