STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208863Ribosome biogenesis protein MAK21. (1023 aa)    
Predicted Functional Partners:
MMYC01_200258
Nucleolar complex protein 2.
   
 
 0.996
MMYC01_204735
rRNA biogenesis protein rrp5.
   
 
 0.992
MMYC01_208671
Nucleolar protein 4.
   
 
 0.980
MMYC01_202946
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.980
MMYC01_202749
ATP-dependent RNA helicase dbp-9.
   
 
 0.980
MMYC01_201504
RNA helicase.
   
 
 0.975
MMYC01_206090
Ribosome biogenesis protein RPF2.
   
 
 0.973
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.970
MMYC01_205552
Putative nucleolar GTP-binding protein 1.
   
 
 0.969
MMYC01_204908
Ribosome biogenesis protein SSF1.
   
   0.967
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.