STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207742Tyrosine--tRNA ligase. (388 aa)    
Predicted Functional Partners:
MMYC01_207337
tRNA-aminoacylation cofactor ARC1.
 
 0.993
MMYC01_204223
Putative methionine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.904
MMYC01_200853
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
      0.899
MMYC01_201507
Tryptophan synthase.
  
  
 0.821
MMYC01_209174
Putative glycine--tRNA ligase.
  
  
 0.819
MMYC01_209956
Tyrosine--tRNA ligase.
    
 0.784
MMYC01_210271
Tyrosine--tRNA ligase.
    
 0.784
MMYC01_205749
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.754
MMYC01_204972
Putative cysteine--tRNA ligase.
   
 
 0.727
MMYC01_206109
Putative methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.717
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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