STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206184DNA mismatch repair protein msh-2. (835 aa)    
Predicted Functional Partners:
MMYC01_205920
DNA mismatch repair protein Mlh1.
 
 0.995
MMYC01_200108
Mismatch repair endonuclease PMS2.
 
 0.994
MMYC01_208592
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.990
MMYC01_201362
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.990
MMYC01_208224
Exodeoxyribonuclease 1.
   
 0.985
MMYC01_201029
PMS1 protein 1.
 
 0.975
MMYC01_207360
Nitrogen assimilation transcription factor nirA.
   
 0.949
MMYC01_204286
Vezatin.
   
 0.939
MMYC01_204287
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.939
MMYC01_208339
DNA mismatch repair protein MLH3.
  
 0.929
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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