STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206856Pre-mRNA-splicing factor slt-11. (386 aa)    
Predicted Functional Partners:
MMYC01_209411
Pre-mRNA-splicing factor ISY1.
   
 0.999
MMYC01_208724
Pre-mRNA-splicing factor clf-1.
   
 0.999
MMYC01_202462
Pre-mRNA-splicing factor cwf14.
   
 0.999
MMYC01_200233
Pre-mRNA-splicing factor syf1.
   
 0.999
MMYC01_205415
Peptidyl-prolyl cis-trans isomerase E.
   
 0.998
MMYC01_203300
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
  0.998
MMYC01_205894
Pre-mRNA-splicing factor prp46.
   
 
 0.987
MMYC01_203649
Pre-mRNA-splicing factor CWC2.
   
 
 0.987
MMYC01_203577
Pre-mRNA-splicing factor cef-1.
   
 
 0.987
MMYC01_208153
Pre-mRNA-processing-splicing factor 8.
    
 
 0.985
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.