STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206045Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
MMYC01_204216
DNA-directed RNA polymerase II subunit RPB11.
    
  0.728
MMYC01_202369
DNA-directed RNA polymerase II subunit RPB3.
    
  0.728
MMYC01_200998
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.725
MMYC01_205237
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.724
MMYC01_203892
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.724
MMYC01_204903
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.721
MMYC01_204162
DNA-directed RNA polymerase II subunit RPB9; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.721
MMYC01_208206
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
  0.714
MMYC01_202902
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
  0.712
MMYC01_204269
Transcription elongation factor S-II.
    
  0.709
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.