STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207334Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (524 aa)    
Predicted Functional Partners:
MMYC01_202817
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.977
MMYC01_208345
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.975
MMYC01_207909
SEH-associated protein 4.
    
 0.975
MMYC01_203376
WD repeat-containing protein 24.
    
 0.975
MMYC01_202085
Maintenance of telomere capping protein 5.
    
 0.975
MMYC01_207880
Uncharacterized protein.
   
 0.971
MMYC01_206918
Nucleoporin NIC96.
   
 0.967
MMYC01_202449
Uncharacterized protein.
   
 0.965
MMYC01_201292
Nucleoporin NUP57.
   
 0.954
MMYC01_204362
Nitrogen permease regulator 3.
  
 
 0.952
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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