Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MMYC01_207334Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (524 aa)    
Predicted Functional Partners:
MMYC01_204362
Nitrogen permease regulator 3.
  
 
 0.988
MMYC01_208345
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
   
 0.986
MMYC01_204376
Vacuolar membrane-associated protein IML1.
    
 0.985
MMYC01_203376
WD repeat-containing protein 24.
    
 0.985
MMYC01_202085
Maintenance of telomere capping protein 5.
    
 0.985
MMYC01_207880
Uncharacterized protein.
   
 0.981
MMYC01_202817
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.981
MMYC01_207909
SEH-associated protein 4.
    
 0.970
MMYC01_202449
Uncharacterized protein.
   
 0.960
MMYC01_206918
Nucleoporin NIC96.
   
 0.959
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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