STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_207354Oxygen-dependent choline dehydrogenase. (162 aa)    
Predicted Functional Partners:
MMYC01_207355
Oxygen-dependent choline dehydrogenase.
 
     0.653
MMYC01_210006
Oxygen-dependent choline dehydrogenase.
  
     0.523
MMYC01_209929
Anaphase-promoting complex subunit 10.
    
 0.481
MMYC01_202302
Alcohol oxidase.
  
     0.473
MMYC01_200093
Cutinase transcription factor 1 alpha.
    
  0.434
MMYC01_209738
Cutinase transcription factor 1 beta.
    
  0.434
MMYC01_205269
Activator of stress genes 1.
    
  0.434
MMYC01_203561
Cutinase transcription factor 1 beta.
    
  0.434
MMYC01_204230
Pyranose dehydrogenase 3.
  
     0.429
MMYC01_208782
Oxygen-dependent choline dehydrogenase.
  
  
  0.411
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.