STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206152Uncharacterized protein. (552 aa)    
Predicted Functional Partners:
MMYC01_202694
Uncharacterized protein.
   
  
 0.820
MMYC01_203585
WD repeat-containing protein 36.
   
   0.819
MMYC01_210208
Something about silencing protein 10.
   
    0.745
MMYC01_209865
Bystin.
   
    0.733
MMYC01_209173
Ribosome production factor 1.
   
    0.731
MMYC01_209745
Nucleolar complex protein 4.
   
    0.727
MMYC01_204565
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.726
MMYC01_205543
Protein SOF1.
   
    0.724
MMYC01_200258
Nucleolar complex protein 2.
   
    0.717
MMYC01_205367
Large subunit GTPase 1.
   
    0.706
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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