STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_205617Cellular nucleic acid-binding protein. (511 aa)    
Predicted Functional Partners:
MMYC01_201991
ATP-dependent RNA helicase mtr4.
   
 
 0.639
MMYC01_205580
Antiviral helicase SKI2.
   
 
 0.460
MMYC01_202236
Chitin synthase; Plays a major role in cell wall biogenesis.
 
  
   0.460
MMYC01_200757
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.451
MMYC01_203180
Protein MAK16; Belongs to the MAK16 family.
   
   0.445
MMYC01_207781
Putative RNA-binding protein sce3.
   
 
 0.439
MMYC01_204441
rRNA-processing protein EBP2.
   
   0.436
MMYC01_209654
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.432
MMYC01_204776
rRNA 2'-O-methyltransferase fibrillarin.
   
 
 0.432
MMYC01_202365
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
  0.431
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.