STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_208573Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.853
MMYC01_201837
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.853
MMYC01_202287
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.852
MMYC01_203542
Uncharacterized protein.
   
 0.851
MMYC01_208147
Uncharacterized protein.
   
 0.846
MMYC01_206070
Ribosomal_S10 domain-containing protein.
   
  0.845
MMYC01_202604
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.839
MMYC01_202138
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.833
MMYC01_203377
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability.
   
 0.833
MMYC01_206488
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.830
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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