STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206337Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating. (487 aa)    
Predicted Functional Partners:
MMYC01_202739
3-keto-steroid reductase.
   
 0.892
MMYC01_203602
Squalene monooxygenase.
   
 
 0.840
MMYC01_202557
Putative squalene synthase.
   
 
 0.823
MMYC01_200624
Histidine biosynthesis trifunctional protein.
    
  0.817
MMYC01_204880
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.813
MMYC01_210611
Uncharacterized protein.
   
 
 0.796
MMYC01_209380
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
   
 0.769
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.744
MMYC01_202287
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.714
MMYC01_208486
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
   
 0.711
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.