STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206347Protein AIR2. (712 aa)    
Predicted Functional Partners:
MMYC01_201991
ATP-dependent RNA helicase mtr4.
   
 
 0.940
MMYC01_205725
Putative splicing factor, arginine/serine-rich 6.
    
 
 0.668
MMYC01_205580
Antiviral helicase SKI2.
   
 
 0.662
MMYC01_206912
Rpb7-binding protein seb1.
   
 
 0.578
MMYC01_205036
WD_REPEATS_REGION domain-containing protein.
   
 
 0.565
MMYC01_202064
Nuclear nucleic acid-binding protein C1D.
   
 
 0.552
MMYC01_203973
Exosome complex component rrp43.
   
 
 0.549
MMYC01_207908
rRNA-processing protein EFG1.
   
   0.519
MMYC01_203119
Exosome complex component rrp45.
   
 
 0.516
MMYC01_202407
Exosome complex component SKI6.
   
  
 0.511
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.