STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_206489U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (542 aa)    
Predicted Functional Partners:
MMYC01_204334
Uncharacterized protein.
   
 0.999
MMYC01_206492
Splicing factor 3B subunit 1.
 
 
 
 0.994
MMYC01_202753
Pre-mRNA-splicing factor srp2.
   
 0.992
MMYC01_207915
Branchpoint-bridging protein.
   
 
 0.991
MMYC01_204365
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
   
 0.989
MMYC01_201480
Polyadenylate-binding protein 2.
 
 
 0.988
MMYC01_208326
Pre-mRNA-splicing factor slu-7.
    
 0.985
MMYC01_205356
Spliceosome-associated protein 49.
   
 
 0.983
MMYC01_203577
Pre-mRNA-splicing factor cef-1.
   
 0.982
MMYC01_207058
Pre-mRNA-splicing factor rse1.
   
 0.965
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.