STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_204459Putative Ras-related protein Rab7. (205 aa)    
Predicted Functional Partners:
MMYC01_209000
GTPase-activating protein GYP7.
   
 0.991
MMYC01_210165
Vacuolar protein sorting-associated protein 18.
   
 
 0.958
MMYC01_210204
Vacuolar protein sorting-associated protein 41.
    
 
 0.958
MMYC01_208338
E3 ubiquitin-protein ligase PEP5.
    
 
 0.958
MMYC01_202126
Vacuolar morphogenesis protein 6.
    
 
 0.958
MMYC01_200547
Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.958
MMYC01_208772
Vacuolar fusion protein MON1.
    
 0.949
MMYC01_210125
Vacuolar fusion protein CCZ1.
    
 0.947
MMYC01_204107
Putative lipase atg15.
    
 
 0.937
MMYC01_210451
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.926
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.