STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_204173Putative E3 ubiquitin ligase complex SCF subunit scon-2. (732 aa)    
Predicted Functional Partners:
MMYC01_204644
Cullin-1; Belongs to the cullin family.
    
 0.949
MMYC01_203707
E3 ubiquitin-protein ligase RBX1.
    
 0.895
MMYC01_202938
Cullin-3-B; Belongs to the cullin family.
    
 0.881
MMYC01_207076
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
 0.878
MMYC01_201206
Regulatory protein cys-3.
    
 
 0.838
MMYC01_204691
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.831
MMYC01_209905
Uncharacterized protein.
    
 0.772
MMYC01_206866
Uncharacterized protein.
    
 0.772
MMYC01_201010
Ribosomal_L2_C domain-containing protein.
    
 0.764
MMYC01_200477
Cell division control protein 4.
  
 
 
0.757
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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