STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203726PHD finger protein 20. (794 aa)    
Predicted Functional Partners:
MMYC01_203727
3-isopropylmalate dehydrogenase.
 
      0.753
MMYC01_205842
Putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC.
   
 0.696
MMYC01_207735
3-isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
 
      0.692
MMYC01_205549
F-box-like/WD repeat-containing protein TBL1X.
  
 
 
 0.665
MMYC01_210679
Uncharacterized protein.
  
 
 
 0.660
MMYC01_206757
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.648
MMYC01_207320
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.648
MMYC01_200912
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.639
MMYC01_202327
Histone-lysine N-methyltransferase EZH2.
   
 0.626
MMYC01_204132
Set1 complex component swd1.
    
  0.606
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.