STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203876Putative cryptochrome DASH, mitochondrial. (601 aa)    
Predicted Functional Partners:
MMYC01_204915
Casein kinase I hhp1; Belongs to the protein kinase superfamily.
    
 0.937
MMYC01_208542
Topoisomerase 1-associated factor 1.
    
 0.880
MMYC01_207675
TNF receptor-associated factor 6.
    
 0.820
MMYC01_204760
SNF1 protein kinase subunit beta-3.
   
 
  0.681
MMYC01_204419
SCF E3 ubiquitin ligase complex F-box protein grrA.
    
 0.636
MMYC01_203384
F-box/LRR-repeat protein 7.
    
 0.636
MMYC01_209587
Putative pectate lyase B.
    
 0.626
MMYC01_210032
Pectate lyase A.
    
 0.626
MMYC01_205373
DNA repair protein rhp7.
    
 0.626
MMYC01_201372
F-box protein At-B.
    
 0.626
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.