STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203621Poly(A) RNA polymerase protein cid1. (1083 aa)    
Predicted Functional Partners:
MMYC01_207525
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.742
MMYC01_209436
ATP-dependent RNA helicase fal-1; Belongs to the DEAD box helicase family.
    
 0.643
MMYC01_208751
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
    
 0.642
MMYC01_206522
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
  0.640
MMYC01_204127
Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
    
 0.621
MMYC01_205018
mRNA cleavage and polyadenylation specificity factor complex subunit pta1.
   
 
 0.566
MMYC01_201822
Uncharacterized protein.
     
 0.565
MMYC01_205746
Virulence protein SSD1.
    
 
 0.539
MMYC01_210584
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.538
MMYC01_209558
Uncharacterized protein.
    
  0.538
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.